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Biochemical Techniques

General Biochemical Techniques used include growth inhibition and colony survival cell culture assays, gel electrophoresis, flow cytometry, gene-specific crosslinking assays, quantitative PCR, Southern blotting, in vitro transcription and SDS-PAGE. Analytical Biochemical Techniques (based on Chemical Analytical Techniques) used are Mass Spectrometry, Nuclear Magnetic Resonance (NMR), and X-Ray Crystallography.

Internet Biochemical Tools

  • EMBL Peptide Search - protein ID from peptide mass and sequence data.
  • FindMod - post-translational modifications by peptide mass.
  • GlycanMass - oligosaccharide mass from structure.
  • GlycoMod - oligosaccharide structures from mass.
  • GlycoSuiteDB - search database with oligosaccharide mass.
  • Javascript Protein Digest - peptide digest masses.
  • Javascipt Fragment Ion Generator for peptides.
  • Mascot Search - peptide mass and sequence tools.
  • Mowse - protein identification from peptide MS data.
  • Protein Prospector - mass spectra interpretation tools.
  • PROWL - identification of proteins from MS data.

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